FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17135435
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA42700.09.6091297
TAGCCAC46550.08.97028354
CACTCAA62100.06.83895648
AGCCACT74800.05.7745365
GCCACTC76250.05.66434536
ACTCAAC77550.05.6618029
TATAGCC98100.05.50459862
Produced by FastQC (version 0.11.5)