FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13867918
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA100650.020.8878219
AGAGCAC100900.020.7647118
GATCGGA128200.016.9702761
AAGAGCA167950.013.0331837
TCGGAAG171950.012.9457213
ATCGGAA190000.011.9054562
GAAGAGC210150.010.4502676
GGAAGAG252950.08.8243755
CGGAAGA306250.07.66475774
CACACGT64350.06.95930610-14
CACGTCT71850.06.252905410-14
ACACGTC77550.05.960425410-14
AGCACAC93100.05.19689210-14
Produced by FastQC (version 0.11.5)