FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083958

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083958
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14283021
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCCCC94250.015.42972858
CCCGGCC122450.012.8180481
CCGGCCG123150.012.3353082
CGCGCCC125950.011.3747847
CGCCCCG133250.010.6435699
GGCCGCG149450.010.2608694
CGGCCGC181400.08.5329983
CCGCGCC207350.07.3259966
GCCGCGC214050.06.96200375
TACTAAT61600.05.002288130-134
Produced by FastQC (version 0.11.5)