FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15136438
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA171000.014.3561479
AGAGCAC176300.013.9245688
GATCGGA178100.013.6316051
TCGGAAG223300.011.1897253
ATCGGAA240200.010.49312
AAGAGCA257700.09.7776237
GGAAGAG304600.08.343075
GAAGAGC310250.08.3071276
CGGAAGA318350.08.0508554
CCTTCAC189250.05.53083941
Produced by FastQC (version 0.11.5)