FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005083985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005083985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15944931
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT53850.011.3033711
GTGAGTA55850.010.9632872
TAAGGGG54650.09.0884959
CCCTAAG27000.08.7980966
CTAAGAG34950.07.41463478
CCTAAGA42000.06.5128157
TACCCTA38850.06.4851644
ACCCTAA50050.06.18449545
CTAGGAG20800.05.745119650-54
TGAGTAT124400.05.4394053
GTCCCTA27953.294601E-65.40855743
ATAAGGG109950.05.3685018
Produced by FastQC (version 0.11.5)