FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14504407
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGATC21200.07.263493140-144
TAGATCG81700.06.587903140-144
TTAGATC35400.06.3012404140-144
GATCGGA250000.06.124903140-144
AGATCGG283600.05.855948140-144
CACACGT115900.05.848374140-144
AGAGCAC161800.05.834759140-144
GAGCACA156450.05.647945140-144
AGCACAC148600.05.549239140-144
GCACACG152600.05.3471966140-144
ACACGTC114100.05.2847686140-144
CACGTCT109350.05.1721535140-144
Produced by FastQC (version 0.11.5)