FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084162

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084162
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14275999
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTACCC50500.08.4106436
CCCCTAG9900.07.999073515-19
CTACCCT54650.07.2450447
CCACCTA53250.07.16996343
CCCTAGA12000.06.83920815-19
AGTCCCT70500.05.99276071
CCTAGAC16000.05.93931215-19
GTCCCTT75550.05.9134122
TTCACAC83200.05.27806857
ACCTACC79600.05.06458045
CACACCT75450.05.05690869
TCACACC84650.05.01757148
Produced by FastQC (version 0.11.5)