FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084189

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084189
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14719599
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTA44800.011.7378932
TAACCCC40600.010.9937019
AGTGAGT40050.010.5542621
GTCTCTT71000.06.77466731
ATAACCC76300.06.5103278
GAGTATA95250.05.74414444
TGAGTAT101400.05.3247963
Produced by FastQC (version 0.11.5)