FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084196

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084196
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14975906
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA65050.010.6187959
GCCACTC77450.08.82578858
AGCCACT99900.06.9864677
GGCCTAA19850.06.959938575-79
AAGCCAC113950.06.37761646
TAGATCG64950.05.3620934140-144
GATCGGA206750.05.3388534140-144
GAGCACA139450.05.0877595140-144
Produced by FastQC (version 0.11.5)