FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16289690
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA148900.07.92987069
AGAGCAC158850.07.75043068
AACACTA56750.07.48478036
ACTATAG54300.07.15996469
CACTATA66150.06.31269938
GATCGGA207200.06.0747321
ACACTAT68950.05.84720137
TCGGAAG233550.05.5199373
Produced by FastQC (version 0.11.5)