FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13208343
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTTA33850.09.5875014
CCCTTAG40050.08.6280335
TAGAGCC48600.07.40630879
TTAGAGC61300.05.9892338
CTTAGAG61950.05.9266617
GCCCCTT65800.05.48087643
TGCCCCT63750.05.3198572
CCTTAGA66200.05.1112376
Produced by FastQC (version 0.11.5)