FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084463

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084463
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13595649
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT31450.012.8797061
GTGAGTA35300.012.445582
TAGCATG32300.011.1411988
TAACCCC42200.09.3802899
GTCTCTT68450.05.9177031
GAGTATA87600.05.5083654
ATAACCC74150.05.3384598
Produced by FastQC (version 0.11.5)