FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14244253
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA20850.011.7334117
ACACACT35200.07.76769736
CACTATA44150.06.35602059
AACACAC49550.06.0989135
ACACTAT40401.8189894E-126.05548528
CTAGCTA9600.05.69689225-29
Produced by FastQC (version 0.11.5)