FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14483495
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGTCC22901.0955773E-86.91669859
CCTTAGT28657.2759576E-116.7850157
CTTAGTC23652.0820153E-86.69735348
TGGCTAG18900.0020983515.33307745
CCCTACT34702.2828135E-75.1870716
CTCCCTA32651.9587824E-65.07399234
Produced by FastQC (version 0.11.5)