FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14695830
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA59400.011.0235859
GCCACTC81450.08.2159888
AACACTA63850.07.09982357
AGCCACT103450.06.5383067
CACTATA78750.06.39610249
AAGCCAC120200.06.2258236
ACACTAT72850.06.22270068
AAACACT98800.05.6807496
CAAACAC94550.05.09905965
Produced by FastQC (version 0.11.5)