FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084647

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084647
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14861555
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA37600.014.169487
CACTATA39650.013.4368839
ACACTAT40100.013.1065548
AAACACT63600.09.1693366
ACCAAAC75200.07.66420653
CCAAACA77800.07.40737774
TACCAAA107050.05.78952362
CAAACAC95600.05.7235535
ATACCAA122900.05.69829751
Produced by FastQC (version 0.11.5)