FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17113434
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATACGTA38000.07.27750351
CCTAGAC6500.06.8671517115-119
TACGTAC33651.8189894E-126.6332512
ACACATA42700.06.06986147
TACACAT42555.456968E-125.75312476
CTAGACC9209.094947E-125.4778776120-124
GTACACA43503.274181E-105.29645355
Produced by FastQC (version 0.11.5)