FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17054113
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTCTA48000.017.5409981
ATCCGAC98550.09.2037617
ACTCTAT104350.09.0400142
TCTATCC133050.07.68523934
TATCCGA122000.07.4346786
CTATCCG138300.06.7145825
TCCGACA155950.06.09312448
CTCTATC199850.05.0804263
Produced by FastQC (version 0.11.5)