FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005084864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005084864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15688165
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA213800.08.2876311
AGAGCGT220500.08.1945738
TCGGAAG238650.07.421573
GAGCGTC254500.07.24124679
AAGAGCG259750.06.95638377
ATCGGAA272900.06.8612852
GAAGAGC300800.05.93529036
TAGATCT65250.05.736824540-44
GGAAGAG313650.05.623275
CGGAAGA352500.05.1473084
Produced by FastQC (version 0.11.5)