Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005084948 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14204652 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 16395 | 0.0 | 9.6894455 | 1 |
AGAGCGT | 15980 | 0.0 | 9.550307 | 8 |
TCGGAAG | 19200 | 0.0 | 8.286725 | 3 |
AAGAGCG | 19950 | 0.0 | 8.154997 | 7 |
GAGCGTC | 20260 | 0.0 | 7.6749506 | 9 |
ATCGGAA | 21385 | 0.0 | 7.5766425 | 2 |
GAAGAGC | 26365 | 0.0 | 6.280224 | 6 |
TAGATCT | 5445 | 0.0 | 6.0549583 | 40-44 |
GGAAGAG | 28390 | 0.0 | 5.9844146 | 5 |
TGTGTAG | 6065 | 0.0 | 5.673244 | 35-39 |