FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15901397
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA15800.013.6708867
ACACACT32800.07.02438976
ACACTAT35401.8189894E-126.50847438
CACTATA34653.6379788E-126.44155849
CTAGCTA7152.3537723E-95.63916125-29
Produced by FastQC (version 0.11.5)