FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15817801
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA135900.012.130299
AGAGCAC142200.011.4410018
GATCGGA166100.010.1597191
TCGGAAG210250.08.491533
AAGAGCA222000.07.8148247
ATCGGAA243600.07.47974062
GAAGAGC263350.06.77918776
GGAAGAG277550.06.4842255
CGGAAGA324550.05.5452064
CGTTAAT68650.05.264169735-39
GCGTTAA75800.05.03353835-39
Produced by FastQC (version 0.11.5)