FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15817801
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA168950.010.5550021
AGAGCGT196600.08.8976298
TCGGAAG218750.08.0299443
AAGAGCG221550.07.99316937
GAGCGTC231650.07.61351639
ATCGGAA245800.07.58706432
GAAGAGC270000.06.5323846
GGAAGAG287450.06.18591555
TAGATCT57300.06.005140340-44
CGGAAGA331050.05.4147094
Produced by FastQC (version 0.11.5)