FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12452279
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA112400.07.55683149
AGAGCAC125850.06.9779958
TTAGCAC29351.3096724E-106.6218557
GATCGGA133500.06.55485961
TCGGAAG150450.05.80015133
AGTGAGT26651.0791591E-65.7462631
GTGAGTA30508.3093255E-85.6748912
TAGCACC36251.9199433E-85.3614198
ATCGGAA180600.05.27111342
TAAGGGG28855.880491E-65.2395929
Produced by FastQC (version 0.11.5)