FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12433486
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCAA58850.018.808091
CCCCAAA91300.013.5636162
CCCAAAA127050.09.6905013
GACTAGT7950.0044769518.15083
CCAAAAA176600.07.45998574
AGAGCAC79550.05.42986068
GAGCACA81800.05.3684939
GATCGGA93700.05.05151131
Produced by FastQC (version 0.11.5)