FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12792975
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA120550.017.4354349
AGAGCAC131400.015.995758
GATCGGA166950.012.9295271
AAGAGCA197550.010.9674747
TCGGAAG199400.010.6339763
ATCGGAA219850.010.0384912
AGTTAGC34050.09.34520535-39
GAGTTAG34500.09.265038530-34
GTTAGCA37050.08.93826735-39
CGAGTTA36750.08.7369730-34
GAAGAGC255900.08.6354556
GGAAGAG266000.08.3616895
CGGAAGA303400.07.18862634
TTAGCAT48300.06.886182335-39
CAGTCAC71050.06.201952525-29
CACGAGT55100.06.166997430-34
TAGCATC55850.06.006845535-39
CTAGATC8400.06.0000243140-144
AGTCACG64950.05.986261425-29
CCAGTCA78050.05.756423525-29
Produced by FastQC (version 0.11.5)