FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16597427
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA56550.020.7518357
ACACTAT60450.019.2903638
CACTATA66900.018.3988939
AAACACT100050.012.2330116
CAAACAC109100.010.9543065
ACCAAAC122300.09.94856553
CCAAACA127250.09.5050194
TACCAAA206200.06.32151272
ATACCAA250100.05.4985491
CTATAGT60350.05.03349910-14
Produced by FastQC (version 0.11.5)