FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14812287
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA197250.07.29970039
GATCGGA198450.07.29092741
AGAGCAC207300.06.84162048
TCGGAAG247650.06.0498873
ATCGGAA262650.05.5946772
AAGAGCA280950.05.40671837
CTAGATC12400.05.225373140-144
Produced by FastQC (version 0.11.5)