FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13333459
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCGT185800.010.0355838
GATCGGA210050.09.5915451
GAGCGTC206200.09.252919
AAGAGCG225500.08.7173177
TCGGAAG247050.07.95765733
ATCGGAA265750.07.72357132
TAGATCT51550.07.6250540-44
GAAGAGC288500.06.93850146
GGAAGAG329900.06.15507755
TACGTGT70400.05.95267930-34
CCTAGAT8305.2204996E-105.3775063140-144
CTAGATC12050.05.3767867140-144
CGGAAGA395700.05.3499294
ACGTGTA76850.05.227650635-39
Produced by FastQC (version 0.11.5)