FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12390979
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA71550.010.9300321
AGAGCAC78900.09.94572458
GAGCACA78900.09.854489
AAGAGCA154600.05.86743077
CCCCCTA23052.3749415E-55.65469071
TCGGAAG151850.05.60263733
ATCGGAA168750.05.38334272
GAAGAGC168400.05.25835566
Produced by FastQC (version 0.11.5)