FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13758850
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCTAA12901.24424205E-57.915491
ATGGTAG53350.07.245711
GGCAGAC213200.06.49988841
ATGGCCA170950.06.35706471
CCCCCTA19801.2657578E-56.26214651
CTAGATC14150.06.004464140-144
TGGTAGT54750.05.79575822
GGCAGAT211250.05.66221861
TGGTCAC98150.05.5842522
GTGGTCA122900.05.57847451
TGGTGGT152900.05.56565432
GACAGAT90800.05.54246231
TGGTACC45607.2759576E-125.53534752
TGGTAGC70650.05.5121792
GACAGAC92350.05.4494371
GGCAGAA226650.05.37403151
TGGTCGT177700.05.3570812
GGCAGCT239100.05.33823821
ATGGCAG145400.05.3171751
TGGCAGT83200.05.28747372
Produced by FastQC (version 0.11.5)