FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17441163
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCCTA21950.09.0518631
CCCCTAG8800.07.852635415-19
GTATAGG91450.07.00074531
CACACAC46800.06.92142967
CCACACA66850.05.27623136
CCCACAC74400.05.22466755
ACACACC67350.05.1301528
GTATATC176500.05.003171
Produced by FastQC (version 0.11.5)