FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16372250
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA133150.08.3260499
CTTGGGA92150.07.7148911
AGAGCAC139950.07.6643058
CTTGGTA81800.07.34706641
CTAGGCT13351.529564E-47.13699671
CTTGGGG89350.07.0543551
CTAGCTA13550.00140451696.49075651
CTTGCTA42900.06.3211751
GATCGGA184700.06.1902921
TCGGAAG205350.06.13768243
CTTGGGC112900.06.10221241
CTTGGCA158050.06.0747751
CTTAACT43700.06.03774071
CTTGGTG145000.05.9644091
CTTGGTC97950.05.91120531
CTTGGGT65600.05.80968951
CTAACCA33159.667929E-95.748351
ATCGGAA232100.05.7126822
CTTGGCC172850.05.5546321
CTTGAGA79300.05.4529591
Produced by FastQC (version 0.11.5)