FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085469

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085469
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12934789
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAGTA30700.09.1632542
AGTGAGT32050.08.8010391
TAGCCCC38300.07.89487939
CCACTCA36800.07.62977559
GCCACTC47100.05.9612468
TAGCCAC37003.0715455E-85.253584
CGTTAAA53907.2759576E-125.07560875
Produced by FastQC (version 0.11.5)