FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17141228
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGACCCA58500.015.6307697
GGGACCC85350.011.6414766
ACATATA68750.010.9963659
ACCCACC88350.010.838719
GACCCAC97450.09.5310428
GACATAT97100.08.378998
ACGGGAC158100.06.87666034
CGGGACC171550.06.253575
CACGGGA191850.05.516813
CTAGATC8102.728484E-105.5111113140-144
CGACATA168700.05.07883837
Produced by FastQC (version 0.11.5)