Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005085499 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15197676 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGTGAGT | 3060 | 0.0 | 15.126409 | 1 |
GTGAGTA | 3560 | 0.0 | 12.951665 | 2 |
TAACCCC | 4550 | 0.0 | 9.967462 | 9 |
ATAACCC | 6940 | 0.0 | 6.8460474 | 8 |
GAGTATA | 8575 | 0.0 | 5.9609094 | 4 |
GAGCACA | 17500 | 0.0 | 5.5944357 | 9 |
TGAGTAT | 8645 | 0.0 | 5.579536 | 3 |
GTATAAC | 8770 | 0.0 | 5.4175105 | 6 |
TATAACC | 9990 | 0.0 | 5.404446 | 7 |
AGAGCAC | 19200 | 0.0 | 5.2490683 | 8 |
CACACGT | 12410 | 0.0 | 5.162926 | 140-144 |