FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16048507
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA35450.015.63832959
GCCACTC58000.010.0547568
ATCTAGC12250.09.05082935-39
AGCCACT76800.07.87467437
CTAGCTC14550.07.323198340-44
CATCTAG16850.06.921796335-39
AAGCCAC100800.06.0711966
TCTAGCT19450.05.774402640-44
CTCACTA25850.05.681617315-19
GGCCTAA25200.05.428289475-79
CCGTTAA90100.05.19396544
Produced by FastQC (version 0.11.5)