FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17598061
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG32600.011.0410285
CTTAGAG40950.08.4380957
TTAGAGC41600.07.7871098
CCCCTTA42450.07.6316394
CCTTAGA44750.07.07810076
TAGAGCC61900.05.81482179
GTGCACA58400.05.66087151
CACACAA53150.05.4180094
Produced by FastQC (version 0.11.5)