FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15965647
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA17153.6379788E-129.6555587
AGTGAGT26200.08.697731
GTGAGTA29300.07.61672
TAACCCC40951.8189894E-125.97776179
CACTATA39302.284105E-85.12954769
Produced by FastQC (version 0.11.5)