FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085754

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085754
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16209815
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA44150.011.5753787
CACTATA48300.011.1769779
ACACTAT46800.010.9190928
ACCAAAC82450.07.1620253
CCAAACA82050.06.66992334
AAACACT94800.06.1502436
CAAACAC108100.05.12720445
Produced by FastQC (version 0.11.5)