FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14874088
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACATTA70600.06.2199669
CACACGT86050.05.5063787140-144
CTAGATC15150.05.4185524140-144
CTAGCTA17650.05.30303925-29
GATCGGA182950.05.0617375140-144
Produced by FastQC (version 0.11.5)