FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085903

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085903
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16239691
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT29550.010.0436051
GTGAGTA34150.07.59173152
TAACCCC44503.6379788E-125.66226249
AGAGCAC130300.05.3041468
GATCGGA128450.05.297331
GAGCACA126750.05.1686299
Produced by FastQC (version 0.11.5)