FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16239691
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT31350.012.384611
GTGAGTA32250.011.1689352
TAACCCC44900.08.0152879
ATAACCC63550.06.4554718
GAGTATA73400.05.2980074
GATCGGA131200.05.0810281
TGAGTAT72500.05.06617833
Produced by FastQC (version 0.11.5)