FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17298704
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTCTA32150.015.74665451
AACACTA54550.08.7041677
ACACTAT59500.08.3427688
CACTATA61750.07.80556879
ACTCTAT70100.07.39131642
AAACACT95750.05.71022036
ACCAAAC85850.05.6993063
TCTATCC109000.05.1480454
Produced by FastQC (version 0.11.5)