FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15996581
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTCTA33650.025.942311
ACTCTAT80650.010.9747982
ATCCGAC94300.09.6125637
TATCCGA109650.08.3981126
TCTATCC116300.08.2271534
CTATCCG118500.08.0137535
CTCTATC158350.06.1798593
TCCGACA157850.05.970458
Produced by FastQC (version 0.11.5)