FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005085998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005085998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16875227
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTCTA33900.015.1395121
CCTAGAC10200.08.322579120-124
ACCACTA60400.07.8612328
CTAGACC11350.07.479323120-124
ACTCTAT79500.07.0604452
TCCTAGA16200.05.595122115-119
ATCCTAG16400.05.4391603115-119
CACCACT96950.05.4169987
CCACTAC100900.05.34744079
ATCCGAC121150.05.10691557
Produced by FastQC (version 0.11.5)