FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086040

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086040
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16078811
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA201300.08.7797691
TCGGAAG218900.08.2253333
AGAGCGT221250.07.96972758
ATCGGAA242150.07.28695872
AAGAGCG247250.07.28086957
CCTCTCA49850.06.7903266
GAGCGTC270600.06.516379
AGTCCCC53600.06.04510071
GGAAGAG316250.05.92107735
GAAGAGC327600.05.8918116
GTCCCCT62050.05.6874682
TAGCATG40853.45608E-105.46173058
CACAAAT95450.05.35626367
CGGAAGA347150.05.35254674
ATCACAA108450.05.24632845
CCCCTCT77050.05.1410044
TCACAAA105400.05.12481986
AGTGAGT33251.8133869E-65.0939161
GTCCTAG15150.05.034725775-79
GTATCCA121850.05.0161231
Produced by FastQC (version 0.11.5)