Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005086045 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14527016 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 56 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATACT | 4010 | 0.0 | 9.57293 | 1 |
GTATACG | 5320 | 0.0 | 7.4879766 | 1 |
GTATATA | 6245 | 0.0 | 7.0747457 | 1 |
GTATAGC | 6410 | 0.0 | 6.8926344 | 1 |
GTATAGA | 6220 | 0.0 | 6.87029 | 1 |
GTATATG | 8535 | 0.0 | 6.788907 | 1 |
GAGCACA | 12520 | 0.0 | 6.382336 | 9 |
GATCGGA | 12225 | 0.0 | 6.339403 | 1 |
GTATAGG | 5615 | 0.0 | 6.320621 | 1 |
GTATTCG | 17305 | 0.0 | 6.3200245 | 1 |
GTATATT | 9585 | 0.0 | 6.271904 | 1 |
GTATGCT | 7720 | 0.0 | 6.09831 | 1 |
GTATAGT | 4560 | 0.0 | 6.035763 | 1 |
GTATTTT | 18315 | 0.0 | 6.011047 | 1 |
GTATATC | 11125 | 0.0 | 5.989647 | 1 |
GTGTTTA | 4030 | 5.456968E-12 | 5.9309235 | 1 |
AGAGCAC | 13685 | 0.0 | 5.8916135 | 8 |
GTATGCA | 6890 | 0.0 | 5.88684 | 1 |
TCGGAAG | 13740 | 0.0 | 5.764235 | 3 |
GTATTGA | 9195 | 0.0 | 5.7502213 | 1 |