Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005086055 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24198200 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGAGCAC | 21230 | 0.0 | 9.83543 | 8 |
GAGCACA | 21280 | 0.0 | 9.778384 | 9 |
GATCGGA | 22125 | 0.0 | 9.609797 | 1 |
TCGGAAG | 28480 | 0.0 | 7.6096816 | 3 |
ATCGGAA | 33540 | 0.0 | 6.787095 | 2 |
AAGAGCA | 36930 | 0.0 | 6.122046 | 7 |
CTAGACC | 1420 | 0.0 | 5.47597 | 75-79 |
GAAGAGC | 41675 | 0.0 | 5.442284 | 6 |
GGAAGAG | 42850 | 0.0 | 5.39387 | 5 |
ACTAGAC | 1740 | 0.0 | 5.296468 | 70-74 |