FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005086144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005086144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15161087
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA202150.06.25494771
AGAGCGT219000.05.88714658
CTAGATC12550.05.622498140-144
TCGGAAG236600.05.4480863
ATCGGAA253300.05.20261342
AAGAGCG252550.05.1621097
GAGCGTC254850.05.03031879
Produced by FastQC (version 0.11.5)